Studies
|
49,592 |
|
Biosamples
|
132,357 |
|
Sequencing Projects
|
409,872 |
|
Analysis Projects
|
321,255 |
| Organisms | 410,919 |
| ORGANISM INFORMATION | |
|---|---|
| GOLD Organism ID |
Go0571179 |
|
Organism Name
|
Pelobacter sp. M08fum |
| Other Names |
|
| Common Name |
|
| Domain |
BACTERIAL |
|
Genus
|
Pelobacter |
| Genus Synonyms |
|
|
Species
|
Pelobacter sp. M08fum |
| Species Synonyms |
|
| Strain |
M08fum |
| Subspecies |
|
|
Phylogenetic Markers
|
|
|
Taxonomy Classification Method
|
|
| Serovar/Cultivar |
|
| Phylum |
PROTEOBACTERIA-DELTA |
|
NCBI Taxonomy ID
|
2771352 |
| Type Strain |
|
| Culture Collection ID |
|
| Organism Type |
Natural |
| Cultured |
Yes |
| Culture Type |
Isolate |
| Comments |
|
| Biosafety Level |
1 |
|
Taxon DOI
|
|
|
Exemplar DOI
|
|
|
Exemplar Name
|
|
| Genbank 16S ID |
|
| Is Public |
Yes |
| Related Sequencing Projects |
1 |
| Related Analysis Projects |
1 |
| NCBI TAXONOMY | |
|---|---|
| NCBI Organism Name |
Pelobacter sp. M08fum |
|
NCBI Tax ID
|
2771352 |
| NCBI Superkingdom |
Bacteria |
| NCBI Kingdom |
|
| NCBI Phylum |
Proteobacteria |
| NCBI Class |
Deltaproteobacteria |
| NCBI Order |
Desulfuromonadales |
| NCBI Family |
Desulfuromonadaceae |
| NCBI Genus |
Pelobacter |
| NCBI Species |
Pelobacter sp. M08fum |
| ORGANISM METADATA | |
|---|---|
| Cell Diameter |
|
| Cell Shape |
|
| Color |
|
| Gram Stain |
|
| Motility |
|
| Oxygen Requirement (MIGS-22) |
Anaerobe |
| pH |
9
|
| Salinity (MIGS-6.3) |
Undefined |
| Pressure |
|
| Sporulation |
|
|
Carbon Source
|
|
| Growth Temperature |
30 Celcius.
|
| Cell Length |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
| Cell Arrangements |
Singles |
| Diseases (MIGS-15) |
Undefined |
| Habitats (MIGS-6) |
Mud |
| Metabolism |
Arsenate-respiring |
| Phenotypes |
Alkaliphile |
| Energy Sources |
Chemotroph |
| Biotic Relationships (MIGS-14) |
Free living |
|
Propagation
|
|
| ORGANISM ISOLATION | |
|---|---|
|
Collection Date
(MIGS-5)
|
8/5/2019 |
|
Sample Isolation Publication
|
|
|
Sample Collection Site
(MIGS-13)
|
terrestrial mud volcano |
| Isolation Country |
|
| Sample Isolation Comments |
|
|
Collection Method
|
serial dilutions |
|
Contact Name
|
Maria Khomyakova |
|
Contact Email
|
mary_klimova@mail.ru |
|
ECOSYSTEM CLASSIFICATION
|
|
|---|---|
| Ecosystem |
Environmental |
| Ecosystem Category |
Terrestrial |
| Ecosystem Type |
Mud volcano |
| Ecosystem Subtype |
Unclassified |
| Specific Ecosystem |
Unclassified |
| Ecosystem Path Id |
4689 |
| ENVIRONMENTAL INFORMATION | |
|
Geographic Location
(MIGS-4)
|
Taman Peninsula, Russia |
|
Latitude
(MIGS-4.1)
|
45.202 |
|
Longitude
(MIGS-4.2)
|
36.783 |
|
LatLong Information
|
Verified |
| Geographical Map | |
| Broad-scale environmental context (MIxS:0000012) |
|
| Local environmental context (MIxS:0000013) |
|
| Environmental medium (MIxS:0000014) |
|
| Altitude (MIGS-4.4) |
|
| Elevation |
|
| Depth (MIGS-4.3) |
|
| Subsurface Depth |
|
| Temperature Range |
Mesophile |
| Sample Collection Temperature |
30 Celcius.
|
| Chlorophyll Concentration |
|
| Nitrate Concentration |
|
| Oxygen Concentration |
|
| Salinity Concentration |
|
| Methane Concentration (mmol) |
|
|
Sample Conductivity
|
|
| Growth Conditions |
|
| Bicarbonate Concentration (mM) |
|
| Soluble Iron Concentration (uM) |
|
| Hydrogen Sulfide Concentration (mM) |
|
| Hydrogen Sulfide Presence |
|
| Irradiance |
|
| ProPortal Ocean |
|
| ProPortal Isolation |
|
| ProPortal Station |
|
| ProPortal WOA Temperature |
|
| ProPortal WOA Salinty |
|
| ProPortal WOA Oxygen |
|
| ProPortal WOA Silicate |
|
| ProPortal WOA Phosphate |
|
| ProPortal WOA Nitrate |
|
