Studies
|
45,784 |
|
Biosamples
|
101,785 |
|
Sequencing Projects
|
356,858 |
|
Analysis Projects
|
284,281 |
| Organisms | 387,737 |
| ORGANISM INFORMATION | |
|---|---|
| GOLD Organism ID |
Go0006325 |
|
Organism Name
|
Muricauda ruestringensis B1, DSM 13258 |
| Other Names |
|
| Common Name |
|
|
NCBI Taxonomy ID
|
886377 |
| Domain |
BACTERIAL |
| Phylum |
BACTEROIDETES |
|
Genus
|
Muricauda |
| Genus Synonyms |
|
|
Species
|
Muricauda ruestringensis |
| Species Synonyms |
|
| Serovar/Cultivar |
|
| Strain |
B1, DSM 13258 |
| Subspecies |
|
| Type Strain |
Yes |
| Culture Collection ID |
DSM 13258 |
| Organism Type |
Natural |
| Cultured |
Yes |
| Culture Type |
Isolate |
| Comments |
|
| Biosafety Level |
1 |
|
Taxon DOI
|
10.1601/tx.8171 |
|
Exemplar DOI
|
10.1601/ex.8171 |
|
Exemplar Name
|
Muricauda ruestringensis |
| Genbank 16S ID |
AF218782 |
| Is Public |
Yes |
| Related Sequencing Projects |
1 |
| Related Analysis Projects |
1 |
| NCBI TAXONOMY | |
|---|---|
| NCBI Organism Name |
Muricauda ruestringensis DSM 13258 |
|
NCBI Tax ID
|
886377 |
| NCBI Superkingdom |
Bacteria |
| NCBI Kingdom |
|
| NCBI Phylum |
Bacteroidetes |
| NCBI Class |
Flavobacteriia |
| NCBI Order |
Flavobacteriales |
| NCBI Family |
Flavobacteriaceae |
| NCBI Genus |
Muricauda |
| NCBI Species |
Muricauda ruestringensis |
| ORGANISM METADATA | |
|---|---|
| Cell Diameter |
|
| Cell Shape |
Rod-shaped |
| Color |
|
| Gram Stain |
Gram- |
| Motility |
Nonmotile |
| Oxygen Requirement (MIGS-22) |
Facultative |
| pH |
|
| Salinity (MIGS-6.3) |
|
| Pressure |
|
| Sporulation |
Nonsporulating |
|
Carbon Source
|
|
| Biotic Relationships (MIGS-14) |
Free living |
| Temperature Range |
Mesophile |
| Growth Temperature |
30 Celcius.
|
| Cell Length |
|
| Commercial Strain |
|
| Commercial Strain Comments |
|
| Cell Arrangements |
|
| Diseases (MIGS-15) |
|
| Habitats (MIGS-6) |
Marine Sediment Aquatic |
| Metabolism |
Xylan degrader |
| Phenotypes |
|
| Energy Sources |
Heterotroph Chemoheterotroph |
| COLLECTION DATE | |
|---|---|
|
Collection Date
(MIGS-5)
|
1/1/2001 |
| ORGANISM ISOLATION | |
|
Sample Isolation Publication
|
International Journal of Systematic and Evolutionary Microbiology
51(Pt 6):1997-2006
Muricauda ruestringensis gen. nov., sp. nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment.
|
|
Sample Collection Site
(MIGS-13)
|
Seawater sediment suspension containing hexadecane; Germany, North Sea coast. |
| Isolation Country |
Germany |
| Sample Isolation Comments |
isolated by U. Maschmann |
|
Sample Collection Method
|
|
|
Contact Name
|
Jonathan Eisen |
|
Contact Email
|
jaeisen@ucdavis.edu |
|
ECOSYSTEM CLASSIFICATION
|
|
|---|---|
| Ecosystem |
Environmental |
| Ecosystem Category |
Aquatic |
| Ecosystem Type |
Marine |
| Ecosystem Subtype |
Oceanic |
| Specific Ecosystem |
Sediment |
| Ecosystem Path Id |
4009 |
| ENVIRONMENTAL INFORMATION | |
|
Geographic Location
(MIGS-4)
|
North Sea coast, Germany |
|
Latitude
(MIGS-4.1)
|
53.45 |
|
Longitude
(MIGS-4.2)
|
8.2 |
|
LatLong Information
|
Inferred |
| Geographical Map | |
| Broad-scale environmental context (MIxS:0000012) |
|
| Local environmental context (MIxS:0000013) |
|
| Environmental medium (MIxS:0000014) |
|
| Altitude (MIGS-4.4) |
|
| Elevation |
|
| Depth (MIGS-4.3) |
|
| Subsurface Depth |
|
| Sample Collection Temperature |
28 Celcius.
|
| Chlorophyll Concentration |
|
| Nitrate Concentration |
|
| Oxygen Concentration |
|
| Salinity Concentration |
|
| Methane Concentration (mmol) |
|
|
Sample Conductivity
|
|
| Growth Conditions |
|
| Bicarbonate Concentration (mM) |
|
| Soluble Iron Concentration (uM) |
|
| Hydrogen Sulfide Concentration (mM) |
|
| Hydrogen Sulfide Presence |
|
| Irradiance |
|
| ProPortal Ocean |
|
| ProPortal Isolation |
|
| ProPortal Station |
|
| ProPortal WOA Temperature |
|
| ProPortal WOA Salinty |
|
| ProPortal WOA Oxygen |
|
| ProPortal WOA Silicate |
|
| ProPortal WOA Phosphate |
|
| ProPortal WOA Nitrate |
|
