BIOSAMPLE INFORMATION
GOLD Biosample ID Gb0195834
Biosample Name Freshwater microbial communities from the Lacamas Lake, Washington, USA – depth 12m
Other Names
Habitat (MIGS-6) freshwater
Community microbial
Location Lacamas Lake
Identifier depth 12m
Add Date 2018-10-26
Last Modified By Galina Ovchinnikova on 2018-11-27
Biosample Description Water from Lake Lacamas sampled during the winter and incubated anoxically with methane for 72h
Biosample Information
Biosample Information Visibility Public
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Aquatic
Ecosystem Type Freshwater
Ecosystem Subtype Lake
Specific Ecosystem Unclassified
BIOSAMPLE COMPOSITION
Number of Studies 1
Number of Seq Projects 1
Number of Analysis Projects 1
Number of Related Biosamples 0
BIOSAMPLE ISOLATION
Sample Collection Site (MIGS-13) water column
Sample Collection Date (MIGS-5)
Sample Collection Publication
Sample Isolation Comments
Sample Isolation Country USA
Sample Collection Method
Added By Laura Villanueva on 2018-10-26
Sample Contact Name Laura Villanueva
Sample Contact Email laura.villanueva@nioz.nl
ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4) USA: Camas, WA
Latitude (MIGS-4.1) 45.62
Longitude (MIGS-4.2) -122.43
Geographical Map
LatLong Information Verified
Altitude  (meter)  (MIGS-4.4)

From: Meters. To: Meters.
Elevation

From: Meters. To: Meters.
Depth (MIGS-4.3)
12
Meters
From: Meters. To: Meters.
Subsurface Depth (m)
Sample Collection Temperature
Salinity (MIGS-6.3) Undefined
Pressure
pH
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Methane Concentration (mmol)
Habitat  freshwater
Bicarbonate Concentration (mM)
Soluble Iron Concentration (uM)
Hydrogen Sulfide Concentration (mM)
Hydrogen Sulfide Presence
Irradiance
Oxygen Presence
GROWTH CONDITIONS
Growth Conditions
WATER ENVIRONMENTAL INFORMATION ( All items editable )
Water Depth  (meter)  (MIGS-4.3) 12
Water Elevation  (meter) 
Water Elevation2  (meter) 
Atmospheric Data
Tidal Stage
PHYSIOCHEMICAL PROPERTIES ( All items editable )
Alkalinity  (milliequivalent per liter) 
Alkyl Diethers  (mole/liter) 
Aminopeptidase Activity  (mole per liter per hour) 
Ammonium - Water  (mole per liter per hour) 
Bacterial Carbon Production  (nanogram per hour) 
Bacterial Production  (milligram per cubic meter per day) 
Bacterial Respiration  (milligram per cubic meter per day) 
Bishomohopanol
Bromide  (parts per million) 
Calcium
Carbon/Nitrogen Ratio
Chemical Administration
Chloride  (milligram per liter) 
Water Chlorophyll Concentration
Water Current
Density  (gram per cubic meter) 
Diether Lipids  (nanogram per liter) 
Dissolved Carbon Dioxide  (micromole per liter) 
Dissolved Hydrogen  (micromole per liter) 
Dissolved Inorganic Carbon  (microgram per liter) 
Dissolved Inorganic Nitrogen  (microgram per liter) 
Dissolved Inorganic Phosphorus  (microgram per liter) 
Dissolved Organic Carbon  (microgram per liter) 
Dissolved Organic Nitrogen  (microgram per liter) 
Downward PAR  (microEinstein per meter per second) 
Flourescence  (milligram chlorophyll a per cubic meter) 
Glucosidase Activity  (mol per liter per hour) 
Light Intensity  (lux) 
Magnesium
Mean Friction Velocity  (meter per second) 
Mean Peak Friction Velocity  (meter per second) 
N Alkanes  (micromole per liter) 
Nitrate Concentration (Water)  (meter) 
Nitrite  (micromole per liter) 
Organic Matter  (microgram per liter) 
Organic Nitrogen  (microgram per liter) 
Organism Count  (number of organism per cubic meter) 
Oxygenation Status of Sample
Particulate Organic Carbon  (microgram per liter) 
Particulate Organic Nitrogen  (microgram per liter) 
Perturbation
Petroleum Hydrocarbons  (micromole per liter) 
Water pH
Phaeopigments  (milligram per cubic meter) 
Phospholipid Fatty Acid
Photon Flux  (micromole per square meter per second) 
Potassium  (parts per million) 
Water Pressure  (meter) 
Primary Production  (milligram per cubic meter per day) 
Water Dissolved Oxygen
Water Phosphate
Water Silicate
Redox Potential  (millivolt) 
Water Salinity (MIGS-6.3)
Sodium water  (parts per million) 
Soluble Reactive Phosphorus  (micromole per liter) 
Sulfate Water
Sulfide water
Suspended Particulate Matter  (milligram per liter) 
Water Collection Temperature  (meter) 
Total Depth Water Column  (meter) 
Total Dissolved Nitrogen  (microgram per liter) 
Total Inorganic Nitrogen  (microgram per liter) 
Total Organic Carbon (Water)  (grams/kilogram) 
Total Particulate Carbon
Total Phosphorus  (micromole per liter) 
Miscellaneous Parameter
SAMPLE PREPARATION ( All items editable )
Sample Storage Duration
Sample Storage Location
Sample Storage Temperature  (degree Celsius) 
Water Pool DNA Extracts
Pool DNA Extracts
Water Sample Weight DNA Extraction

 

 

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