BIOSAMPLE INFORMATION
GOLD Biosample ID Gb0192503
Biosample Name Adult mouse fecal pellets
Other Names gut metagenome
Habitat (MIGS-6) fecal
Community microbial/bacterial
Location healthy mouse
Identifier male 12-week-old NOD/shiltj mouse
Add Date 2018-08-26
Last Modified By Supratim Mukherjee on 2019-05-08
Biosample Description Fecal pellets from a male 12-week-old NOD/shiltj mouse were collected and SMRT sequenced using a 10kb library
Biosample Information
Biosample Information Visibility Public
ECOSYSTEM CLASSIFICATION
Ecosystem Host-associated
Ecosystem Category Microbial
Ecosystem Type Bacteria
Ecosystem Subtype Unclassified
Specific Ecosystem Unclassified
BIOSAMPLE COMPOSITION
Number of Studies 1
Number of Seq Projects 1
Number of Analysis Projects 0
Number of Related Biosamples 0
BIOSAMPLE ISOLATION
Sample Collection Site (MIGS-13) fecal
Sample Collection Date (MIGS-5) 10/2016
Sample Collection Publication
Sample Isolation Comments
Sample Isolation Country USA
Sample Collection Method selection on fecal samples
Added By Hongbin Liu on 2018-08-26
Sample Contact Name John Beaulaurier
Sample Contact Email fanggang@gmail.com
ENVIRONMENTAL INFORMATION
Geographic Location (MIGS-4) USA: New York, NY
Latitude (MIGS-4.1) 40.74148
Longitude (MIGS-4.2) 73.974385
Geographical Map
LatLong Information Verified
Altitude  (meter)  (MIGS-4.4)

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Depth (MIGS-4.3)

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Subsurface Depth (m)
Sample Collection Temperature
Salinity (MIGS-6.3)
Pressure
pH
Chlorophyll Concentration
Nitrate Concentration
Oxygen Concentration
Salinity Concentration
Methane Concentration (mmol)
Habitat  fecal
Bicarbonate Concentration (mM)
Soluble Iron Concentration (uM)
Hydrogen Sulfide Concentration (mM)
Hydrogen Sulfide Presence
Irradiance
Oxygen Presence
GROWTH CONDITIONS
Growth Conditions
Isolation Host Name Mus musculus
Host Taxonomy ID
Host Gender Male
Host Race
Host Age 12-week-old
Host Health Condition health
Patient Visit Number
Host Medication No
Medical Record Number
Host Body Site
Host Body Subsite
Host Body Product
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Host Comments

 

 

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