Studies
|
47,510 |
|
Biosamples
|
122,151 |
|
Sequencing Projects
|
392,155 |
|
Analysis Projects
|
311,845 |
| Organisms | 403,926 |
 - indicates that you can edit this field inline. Click return to save your edits. | |
| BIOSAMPLE INFORMATION | |
|---|---|
|
GOLD Biosample ID
|
Gb0056313 |
|
Biosample Name
|
Acidomyces richmondensis microbial communities from an AMD in Iron Mountain, California, USA - streamer biofilm Metatranscriptome - polyA selected |
|
Other Names
|
|
|
Habitat
(MIGS-6)
|
Acid Mine Drainage (AMD) |
|
Community
|
fungal community |
|
Location
|
from Richmond mine, Iron Mountain, CA |
|
Identifier
|
|
|
Add Date
|
2013-02-08 |
|
Biosample Description
|
|
|
Biosample Information
|
|
|
Biosample Information Visibility
|
Public |
|
ECOSYSTEM CLASSIFICATION
|
|
| Ecosystem |
Environmental |
| Ecosystem Category |
Aquatic |
| Ecosystem Type |
Freshwater |
| Ecosystem Subtype |
Groundwater |
| Specific Ecosystem |
Acid Mine Drainage |
| Ecosystem Path Id |
4164 |
| BIOSAMPLE COMPOSITION | |
| Number of Studies |
1 |
| Number of Seq Projects |
1 |
| Number of Analysis Projects |
0 |
| Number of Related Biosamples |
3 |
| - indicates that you can edit this field inline. Click return to save your edits. | |
| BIOSAMPLE ISOLATION | |
|---|---|
|
Sample Collection Site
(MIGS-13)
|
Iron Mountain Mine, Redding, CA, USA |
|
Sample Collection Date
(MIGS-5)
|
10/20/2011 |
|
Sample Collection Publication
|
|
| Sample Isolation Comments |
|
|
Size Fraction
|
|
| Sample Isolation Country |
USA |
|
Sample Collection Method
|
Biofilm from Iron Mountain Mine, Redding, CA |
|
Sample Contact Name
|
Steven Singer |
|
Sample Contact Email
|
SWSinger@lbl.gov |
| - indicates that you can edit this field inline. Click return to save your edits. | |
| ENVIRONMENTAL INFORMATION | |
|---|---|
|
Geographic Location
(MIGS-4)
|
Iron Mountain Mine, Redding, CA, USA |
|
Latitude
(MIGS-4.1)
|
40.7 |
|
Longitude
(MIGS-4.2)
|
-122.5 |
|
LatLong Information
|
|
| Geographical Map | |
| Broad-scale environmental context (MIxS:0000012) |
aquatic biome (ENVO_00002030)
|
| Local environmental context (MIxS:0000013) |
acid mine drainage (ENVO_00001997)
|
| Environmental medium (MIxS:0000014) |
biofilm (ENVO_00002034)
|
|
Altitude
(meter)
(MIGS-4.4)
|
|
| Elevation |
0 Meters.
|
|
Depth
(MIGS-4.3)
|
0 Meters.
|
| Subsurface Depth |
|
| Sample Collection Temperature |
|
| Salinity (MIGS-6.3) |
|
| Pressure |
|
| pH |
|
| Chlorophyll Concentration |
|
| Nitrate Concentration |
|
| Oxygen Concentration |
|
| Salinity Concentration |
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| Methane Concentration (mmol) |
|
|
Sample Conductivity
|
|
| Habitat |
Acid Mine Drainage (AMD) |
| Bicarbonate Concentration (mM) |
|
| Soluble Iron Concentration (uM) |
|
| Hydrogen Sulfide Concentration (mM) |
|
| Hydrogen Sulfide Presence |
|
| Irradiance |
|
| Oxygen Presence |
|
| GROWTH CONDITIONS | |
| Growth Conditions |
|
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