ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0503139
Analysis Project Name Coprinopsis cinereal x fungal highway bacteria co-culture from University of Neuchatel, Switzerland - ATCcR3C-21
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 268203
Completion Status Complete
IMG Completion Date 2022-05-08
PI patrick chain
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.15.2
Scaffold Count 69836
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 163836
Estimated Size 117265829
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.1.5
Added By JGI automated process on 2021-10-02
Last Modified By JGI automated process on 2022-07-08
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300052300
IMG Metagenome bin count 0
IMG Predicted viruses
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Fungi and Bacteria interaction communities from University of Neuchatel, Neuchatel, Switzerland
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects (DAP) 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1333950 (Portal)
ITS Analysis Project Name Coprinopsis cinerea ATCcR3C-21
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 1
JGI Award DOI 10.46936/fics.proj.2019.50958/60000125

 

 

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