ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0490247
Analysis Project Name Shigella flexneri FDAARGOS_714
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SMRT v. 2.3.0, HGAP v. 3
IMG Decontamination
IMG Decontamination Method
Scaffold Count
Contig Count 6
Gene Calling Method (MIGS-32)
Gene Count 5136
Estimated Size 5000000
Sequencing Depth (MIGS-31.1) 493.63x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline
Added By JGI automated process on 2021-03-19
Last Modified By
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
Genbank Accession
Genbank ID CP055127 (GCA_013391325.1)
Release Date 2020-06-23
NCBI Genbank Version CP055127.1
Genbank ID CP055126 (GCA_013391325.1)
Release Date 2020-06-23
NCBI Genbank Version CP055126.1
Genbank ID CP055125 (GCA_013391325.1)
Release Date 2020-06-23
NCBI Genbank Version CP055125.1
Genbank ID CP055124 (GCA_013391325.1)
Release Date 2020-06-23
NCBI Genbank Version CP055124.1
Genbank ID CP055128 (GCA_013391325.1)
Release Date 2020-06-23
NCBI Genbank Version CP055128.1
Genbank ID CP055129 (GCA_013391325.1)
Release Date 2020-06-23
NCBI Genbank Version CP055129.1
Genbank Release Date 2020-06-23
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing as part of FDA-ARGOS: dAtabase for Regulatory Grade micrObial Sequences project
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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