ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0480648
Analysis Project Name Metatrasiptome of soil microbial communities from artificial tropical rainforest in Tucson, Arizona, USA - UA_B2_WALD P15SSC1_190915_i (Metagenome Metatranscriptome)
Analysis Project Name Stem Metatrasiptome of soil microbial communities from artificial tropical rainforest in Tucson, Arizona, USA - UA_B2_WALD P15SSC1_190915_i
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 252979
Completion Status Complete
IMG Completion Date 2021-05-10
PI Malak Tfaily
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2021-04-22 04:56:55 - MEGAHIT v1.2.9
Scaffold Count 188084
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 212639
Estimated Size 81820119
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.23
Added By JGI automated process on 2020-12-23
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300045458
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Soil microbial communities from artificial tropical rainforest in Tucson, Arizona, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1292294 (Portal)
ITS Analysis Project Name UA_B2_WALD_metaT P15SSC1_190915_i Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1
JGI Award DOI 10.46936/fics.proj.2019.50971/60000130

 

 

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