ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0450872
Analysis Project Name Metatranscriptome of sediment microbial communities from hot spring in Yellowstone Nat. Park, Wyoming, USA - Treefall.Jun19.R3 (Metagenome Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of sediment microbial communities from hot spring in Yellowstone Nat. Park, Wyoming, USA - Treefall.Jun19.R3
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 249629
Completion Status Complete
IMG Completion Date 2021-02-12
PI Rebecca Mueller
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2020-10-15 04:24:40 - MEGAHIT v1.2.9
Scaffold Count 91082
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 131915
Estimated Size 65836506
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.23
Added By JGI automated process on 2020-07-29
Last Modified By JGI automated process on 2021-11-07
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300043280
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sediment microbial communities from hot springs in Yellowstone Nat. Park, Wyoming, USA
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1260243 (Portal)
ITS Analysis Project Name Treefall.Jun19.R3 Annotation
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60001182

 

 

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