ANALYSIS PROJECT INFORMATION | |
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GOLD Analysis Project ID
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Ga0439196 |
Analysis Project Name |
Lab-enriched soil microbial communities from a contaminated agricultural site, Guadeloupe, France - GammaHCH MSP |
Analysis Project Name Stem |
Lab-enriched soil microbial communities from a contaminated agricultural site, Guadeloupe, France - GammaHCH |
Analysis Project Name Suffix
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MSP |
Analysis Project Type
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Metagenome Analysis |
IMG Submission ID
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234862 |
Completion Status |
Complete |
IMG Completion Date
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2020-07-30 |
PI | Elizabeth A. Edwards |
Analysis Project Description
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Metaspades assembly o fGammaHCH |
Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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spades v. 3.12.0 |
Scaffold Count
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1045731 |
Contig Count
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|
Gene Calling Method
(MIGS-32)
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|
Gene Count |
1332451 |
Estimated Size |
574130157 |
Sequencing Depth
(MIGS-31.1)
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|
Genbank Anomalous Assembly |
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Genbank Anomalous Reason |
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Annotation Pipeline |
IMG Annotation Pipeline v.5.0.18 |
Added By |
Camilla Nesbø
on 2020-06-04 |
Last Modified By |
JGI automated process
on 2021-10-11 |
ORF Comparison Tools
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PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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3300040736 |
IMG Metagenome bin count |
23 |
IMG Predicted viruses |
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Genbank Accession
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Genbank Release Date |
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SRA Runs |
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ANALYSIS PROJECT COMPOSITION | |
Study |
Metagenomes of anaerobic enrichment cultures that dechlorinate hexachlorocyclohexane isomers |
Number of Studies
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1 |
Number of Biosamples
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1 |
Number of Projects
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1 |
Number of Related Analysis Projects
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1 |
Derived Analysis Projects (DAP)
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0 |
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