Studies
|
55,454 |
|
Biosamples
|
180,982 |
|
Sequencing Projects
|
500,352 |
|
Analysis Projects
|
370,902 |
| Organisms | 476,138 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0439196 |
| Analysis Project Name |
Lab-enriched soil microbial communities from a contaminated agricultural site, Guadeloupe, France - GammaHCH MSP |
| Analysis Project Name Stem |
Lab-enriched soil microbial communities from a contaminated agricultural site, Guadeloupe, France - GammaHCH |
|
Analysis Project Name Suffix
|
MSP |
|
Analysis Project Type
|
Metagenome Analysis |
|
IMG Submission ID
|
234862 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2020-07-30 |
| PI | Elizabeth A. Edwards |
|
Analysis Project Description
|
Metaspades assembly o fGammaHCH |
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
spades v. 3.12.0 |
|
Scaffold Count
|
1045731 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
1332451 |
| Estimated Size |
574130157 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.18 |
| Added By | Camilla Nesbø on 2020-06-04 |
| Last Modified By | JGI automated process on 2021-10-11 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300040736 |
| IMG Metagenome bin count |
23 |
| IMG Predicted viruses |
|
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Metagenomes of anaerobic enrichment cultures that dechlorinate hexachlorocyclohexane isomers |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
1 |
|
Derived Analysis Projects (DAP)
|
0 |
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