Studies
|
52,222 |
|
Biosamples
|
170,233 |
|
Sequencing Projects
|
472,659 |
|
Analysis Projects
|
360,434 |
| Organisms | 460,481 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0438910 |
| Analysis Project Name |
Thiomicrorhabdus sp. HH3 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Genome Analysis (Isolate) |
|
IMG Submission ID
|
234092 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2020-06-03 |
| PI | Kathleen Scott |
|
Analysis Project Description
|
annotation of HH3 genome data |
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
SPAdes v. 3.7 |
|
IMG Decontamination
|
No |
|
IMG Decontamination Method
|
|
|
Scaffold Count
|
62 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
2422 |
| Estimated Size |
2494471 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
IMG Annotation Pipeline v.5.0.15 |
| Added By |
Kathleen Scott
on 2020-05-13 |
| Last Modified By |
JGI automated process
on 2020-06-20 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
2873448755 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Florida cave isolates |
|
Number of Studies
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
0 |
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