ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0394522
Analysis Project Name Prefix Bacteroidetes bacterium SCGC AD-305-A20v2
Analysis Project Name Suffix decontaminated
Analysis Project Type Single Cell Analysis (screened)
IMG Submission ID 219140
Completion Status Incomplete
IMG Completion Date
PI Steven J. Hallam
Description Marine pelagic microbial single-cell genomes from the Northastern Subarctic Pacific Ocean (NESAP) and Saanich Inlet, Strait of Georgia, Northeast Pacific Ocean
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Spades v.3.9
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.5.0.3
Added By Alvaro M. Plominsky on 2019-07-12
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Single-cell microbial genomes from expanding oxygen minimum zones (OMZs) of the northeastern subarctic Pacific Ocean (NESAP)
Number of Studies 1
Number of Biosamples 0
Number of Projects 1
Number of Related Analysis Projects 2
Derived Analysis Projects 0

 

 

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