ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0374167
Analysis Project Name Prefix Enrichment culture of microbial communities from JGI pond, Walnut Creek, California, United States - JGI Pond Phototropic Consortia - 30
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI Tanja Woyke
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) metaspades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By JGI automated process on 2019-04-03
Last Modified By JGI automated process on 2019-10-06
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Studying microbial cell-cell associations in a wide range of aquatic ecosystems
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1245482 (Portal)
ITS Analysis Project Name JGI Pond Phototropic Consortia - 30
ITS Analysis Product Name Metagenome Minimal Draft
ITS NCBI Taxon ID
ITS Version Number

 

 

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