ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0339069
Analysis Project Name Prefix Mannheimia haemolytica 2428MH
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 227332
Completion Status Complete
IMG Completion Date 2020-01-27
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.5.0
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 81
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2874
Estimated Size 2672676
Sequencing Depth (MIGS-31.1) 99.5x
Annotation Pipeline IMG Annotation Pipeline v.5.0.10
Added By JGI automated process on 2019-01-01
Last Modified By JGI automated process on 2020-02-06
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2854823971
IMG RNA-Seq ID
Genbank Accession
Genbank ID LQDZ00000000 (GCA_001930325.1)
Release Date 2017-04-06
NCBI Genbank Version LQDZ01
Assembly Accession GCA_001930325.1
Genbank Release Date 2017-04-06
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Bovine respiratory disease (BRD) relevant bacteria
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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