ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0338486
Analysis Project Name Prefix Rathayibacter rathayi Z007
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 234283
Completion Status Complete
IMG Completion Date 2020-06-03
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.7.0
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 70
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3038
Estimated Size 3055270
Sequencing Depth (MIGS-31.1) 276.039x
Annotation Pipeline IMG Annotation Pipeline v.5.0.15
Added By JGI automated process on 2018-12-28
Last Modified By JGI automated process on 2020-06-15
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2873975627
Genbank Accession
Genbank ID PSXQ00000000 (GCA_002933215.1)
Release Date 2018-02-21
NCBI Genbank Version PSXQ01
Assembly Accession GCA_002933215.1
Genbank Release Date 2018-02-21
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study A population study of Rathayibacter toxicus and related novel Rathayibacter species
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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