ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0336214
Analysis Project Name Prefix Rathayibacter rathayi AY1E7
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.11.1
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 88
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3124
Estimated Size 3273410
Sequencing Depth (MIGS-31.1) 196.684x
Annotation Pipeline
Added By JGI automated process on 2018-12-21
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank
Genbank ID PSVJ00000000 (GCA_002930915.1)
Release Date 2018-02-21
NCBI Genbank Version PSVJ01
Assembly Accession GCA_002930915.1
Genbank Release Date 2018-02-21
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study A population study of Rathayibacter toxicus and related novel Rathayibacter species
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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