ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0325788
Analysis Project Name Prefix Sorted cell/s from fresh water in Lake Michigan, Michigan, United States - Uncultured microbe JGI_GLakes.MI41M.SYBR.02.M22
Analysis Project Name Suffix
Analysis Project Type Metagenome - Single Particle Sort
IMG Submission ID 207368
Completion Status Complete
Completion Date 2019-02-05
PI Maureen Coleman
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.13.0
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 33
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 200
Estimated Size 165991
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.6
Added By JGI automated process on 2018-11-08
Last Modified By JGI automated process on 2019-02-05
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300033257
IMG RNA-Seq ID
Genbank ID
Assembly Accession
Assembly Methods
ANALYSIS PROJECT COMPOSITION
Study Freshwater microbial and viral communities from the Laurentian Great Lakes in the United States and Canada
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1230875 (Portal)
ITS Analysis Project Name Uncultured microbe JGI_GLakes.MI41M.SYBR.02.M22
ITS Analysis Product Name Single Particle Sort, 16S Negative, Unscreened
ITS NCBI Taxon ID
ITS Version Number

 

 

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