ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0325133
Analysis Project Name Prefix Acidovorax carolinensis NA3
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 202624
Completion Status Complete
IMG Completion Date 2018-11-17
PI David Singleton
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SMRT Analysis v 2.2 with HGAP3
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3993
Estimated Size 4122625
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By JGI automated process on 2018-11-06
Last Modified By JGI automated process on 2018-12-10
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2808606526
IMG RNA-Seq ID
Genbank
Genbank ID CP021361 (GCA_002157145.1)
Release Date 2017-08-04
NCBI Genbank Version CP021361.1
Assembly Accession GCA_002157145.1
Genbank Release Date 2017-08-04
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study PAH-degrading Acidovorax strains
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects 0

 

 

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