ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0321445
Analysis Project Name Prefix Chlamydia muridarum Nigg3
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 202633
Completion Status Complete
Completion Date 2018-11-17
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) BWA v. 0.7.5a-r405; MATLAB v. r2014a
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 1
Contig Count 1
Gene Calling Method (MIGS-32)
Gene Count 936
Estimated Size 1072951
Sequencing Depth (MIGS-31.1) 750x
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By JGI automated process on 2018-11-02
Last Modified By JGI automated process on 2018-12-04
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2808606535
IMG RNA-Seq ID
Genbank
Genbank ID CP009760 (GCA_000772145.1)
Release Date 2017-04-02
NCBI Genbank Version CP009760.1
Assembly Accession GCA_000772145.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Chlamydia muridarum strains
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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