ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0315741
Analysis Project Name Prefix Forest Soil Metatranscriptomics Site 2 LB Combined Assembly
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 206134
NCBI BioProject ID
NCBI BioProject Accession
NCBI BioSample Accession
Completion Status Complete
Completion Date 2019-01-22
PI Francis M. MARTIN
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. MEGAHIT v1.1.2
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 4079856
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4692595
Estimated Size 2528048767
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.6
Added By JGI automated process on 2018-10-02
Last Modified By JGI automated process on 2019-01-23
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300032739
IMG RNA-Seq ID
Genbank ID
Assembly Accession
Assembly Methods
ANALYSIS PROJECT COMPOSITION
Study Forest soil microbial communities from France, Sweden, Spain and USA, for metatranscriptomics studies
Number of Studies 1
Number of Biosamples 12
Number of Projects 12
Derived Analysis Projects 13
JGI INFORMATION
ITS Analysis Project ID 1227307 (Portal)
ITS Analysis Project Name Forest Soil Metatranscriptomics Site 2 LB Combined Assembly
ITS Analysis Product Name Co-Assembly - Eukaryotic Community Metatranscriptome
ITS NCBI Taxon ID
ITS Version Number

 

 

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