ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0310838
Analysis Project Name Prefix Sorghum-adapted microbial communities enriched on stacked mutant (SM) sorghum from Joint BioEnergy Institute, Emeryville, California, United States - SM_Day14_6
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 202241
Completion Status Complete
IMG Completion Date 2018-11-09
PI Steven W. Singer
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.11.1
Scaffold Count 101818
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 221788
Estimated Size 152291798
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By JGI automated process on 2018-08-25
Last Modified By JGI automated process on 2021-09-16
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300031464
IMG Metagenome bin count 10
IMG Predicted viruses 25
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Lab enriched sorghum-adapted microbial communities from Joint BioEnergy Institute, Emeryville, California, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
Derived Analysis Projects (DAP) 1
JGI INFORMATION
ITS Analysis Project ID 1204028 (Portal)
ITS Analysis Project Name SM_Day14_6 metagenome
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 1

 

 

  You are going to add the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the AP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Changing the AP visibility will also change downgrade visibility on the following items:

 

Do you want to continue with this visibility change?