ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0310828
Analysis Project Name Prefix Sorghum-adapted microbial communities enriched on wild type (WT) sorghum from Joint BioEnergy Institute, Emeryville, California, United States - WT_Day14_5
Analysis Project Name Suffix
Analysis Project Type Metagenome Analysis
IMG Submission ID 202242
Completion Status Complete
IMG Completion Date 2018-11-09
PI Steven W. Singer
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.11.1
Scaffold Count 109506
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 254770
Estimated Size 181443380
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By JGI automated process on 2018-08-25
Last Modified By JGI automated process on 2021-09-16
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300031466
IMG Metagenome bin count 9
IMG Predicted viruses 48
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Lab enriched sorghum-adapted microbial communities from Joint BioEnergy Institute, Emeryville, California, United States
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
Derived Analysis Projects (DAP) 0
JGI INFORMATION
ITS Analysis Project ID 1204008 (Portal)
ITS Analysis Project Name WT_Day14_5 metagenome
ITS Analysis Product Name Metagenome Minimal Draft
ITS Version Number 1

 

 

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