ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0303128
Analysis Project Name Prefix Amylibacter kogurei 4G11
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 193853
Completion Status Complete
IMG Completion Date 2018-08-06
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Platanus v. 1.2.4
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 13
Contig Count 16
Gene Calling Method (MIGS-32)
Gene Count 2931
Estimated Size 2980174
Sequencing Depth (MIGS-31.1) 183.0x
Annotation Pipeline IMG Annotation Pipeline v.4.16.4
Added By JGI automated process on 2018-05-26
Last Modified By JGI automated process on 2018-08-17
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2788500138
IMG RNA-Seq ID
Genbank
Genbank ID MDGM00000000 (GCA_002742285.1)
Release Date 2017-11-05
NCBI Genbank Version MDGM01
Assembly Accession GCA_002742285.1
Genbank Release Date 2017-11-05
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing and assembly of bacterial isolates from the sea surface microlayer and underlying water of Aburatsubo Inlet
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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