ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0255709
Analysis Project Name Prefix Flavobacterium johnsoniae 379
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 184394
Completion Status Complete
Completion Date 2018-04-16
PI Daniel Schachtman
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.11.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP Yes
Scaffold Count 12
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4318
Estimated Size 4910437
Sequencing Depth (MIGS-31.1) 286x
Annotation Pipeline IMG Annotation Pipeline v.4.16.2
Added By JGI automated process on 2018-01-30
Last Modified By JGI automated process on 2018-05-02
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2775506741
IMG RNA-Seq ID
Genbank
Assembly Accession
ANALYSIS PROJECT COMPOSITION
Study Sorghum-associated microbial communities from plants grown in Nebraska, USA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1186810 (Portal)
ITS Analysis Project Name Flavobacterium johnsoniae 379
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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