ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0206564
Analysis Project Name Prefix Vibrio parahaemolyticus sv. O3:Kuk CDC_K5126
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.1.1
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count
Contig Count 152
Gene Calling Method (MIGS-32)
Gene Count 4864
Estimated Size 5143760
Sequencing Depth (MIGS-31.1) 214x
Annotation Pipeline
Added By JGI automated process on 2017-07-28
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank
Genbank ID MITV00000000 (GCA_001728325.1)
Release Date 2017-03-20
NCBI Genbank Version MITV01
Assembly Accession GCA_001728325.1
Genbank Release Date 2017-03-20
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Whole genome sequencing of cultured Vibrio parahaemolyticus strains
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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