ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0206396
Analysis Project Name Prefix Stappia sp. ARW1T
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 163418
Completion Status Complete
Completion Date 2017-11-29
PI Xavier Mayali
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.10.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP Yes
Scaffold Count 10
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4368
Estimated Size 4805637
Sequencing Depth (MIGS-31.1) 312x
Annotation Pipeline IMG Annotation Pipeline v.4.15.2
Added By JGI automated process on 2017-07-26
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2758568492
IMG RNA-Seq ID
Genbank
Assembly Accession
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Phycosphere-associated microbial communities from algal ponds
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1147411 (Portal)
ITS Analysis Project Name Stappia sp. ARW1T
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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