ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0187393
Analysis Project Name Prefix Roseobacter sp. SCGC AG-487_B10
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (screened)
IMG Submission ID 128360
Completion Status Complete
Completion Date 2017-05-11
PI Frank Stewart
Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.9.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP
Scaffold Count 26
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 639
Estimated Size 597337
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2017-05-03
Last Modified By JGI automated process on 2019-02-17
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2731639249
IMG RNA-Seq ID
Genbank
Assembly Accession
ANALYSIS PROJECT COMPOSITION
Study Microbial and viral regulation of community carbon cycling across diverse low-oxygen zones
Number of Studies 1
Number of Biosamples 0
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1128282 (Portal)
ITS Analysis Project Name Roseobacter bacterium SCGC AG-487_B10 Screened
ITS Analysis Product Name Microbial Minimal Draft Single Cell Screened Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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