ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0187223
Analysis Project Name Prefix Megasphaera elsdenii NCIMB 702410
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 159730
Completion Status Complete
IMG Completion Date 2017-11-13
PI Adam Guss
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP v. 2.3.0_p5,protocol version=2.3.0 method=RS_HGAP_Assembly.3,smrtpipe.py v1.87.139483,
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP Yes
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2460
Estimated Size 2569548
Sequencing Depth (MIGS-31.1) 187x
Annotation Pipeline IMG Annotation Pipeline v.4.15.2
Added By JGI automated process on 2017-04-30
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2757320373
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study PacBio sequencing to determine microbial DNA methylation
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 3
JGI INFORMATION
ITS Analysis Project ID 1149835 (Portal)
ITS Analysis Project Name Megasphaera elsdenii NCIMB 702410
ITS Analysis Product Name Microbial Improved Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 2

 

 

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