| ANALYSIS PROJECT INFORMATION | |
|---|---|
GOLD Analysis Project ID
|
Ga0183444 |
| Analysis Project Name Prefix |
Pedobacter bauzanensis DSM 22554 |
|
Analysis Project Name Suffix
|
|
|
Analysis Project Type
|
Genome Analysis |
|
IMG Submission ID
|
131158 |
| Completion Status |
Complete |
|
Completion Date
|
2017-05-30 |
| PI | Markus Göker |
|
Description
|
|
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
spades v. 3.9.0 |
|
IMG Decontamination
|
Yes |
|
IMG Decontamination Method
|
PhiX decontamination |
| GenePRIMP |
Yes |
|
Scaffold Count
|
6 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
2783 |
| Estimated Size |
3081443 |
|
Sequencing Depth
(MIGS-31.1)
|
348x |
| Annotation Pipeline |
IMG Annotation Pipeline v.4.15.1 |
| Added By |
JGI automated process
on 2017-04-09 |
| Last Modified By |
JGI automated process
on 2017-05-20 |
| Non-SP-Owner AP |
No |
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
2734482284 |
| IMG RNA-Seq ID |
|
|
Genbank ID
|
|
| Assembly Accession |
|
| Assembly Methods |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II (KMG-II): from individual species to whole genera |
|
Number of Studies
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
0 |
|
Derived Analysis Projects
|
0 |
| JGI INFORMATION | |
|
ITS Analysis Project ID
|
1139728 (Portal) |
|
ITS Analysis Project Name
|
Pedobacter bauzanensis DSM 22554 |
|
ITS Analysis Product Name
|
Microbial Minimal Draft Isolate Genome |
| ITS NCBI Taxon ID |
|
| ITS Version Number |
1 |
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