ANALYSIS PROJECT INFORMATION | |
---|---|
GOLD Analysis Project ID
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Ga0183444 |
Analysis Project Name Prefix |
Pedobacter bauzanensis DSM 22554 |
Analysis Project Name Suffix
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|
Analysis Project Type
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Genome Analysis |
IMG Submission ID
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131158 |
Completion Status |
Complete |
Completion Date
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2017-05-30 |
PI | Markus Göker |
Description
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|
Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
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spades v. 3.9.0 |
IMG Decontamination
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Yes |
IMG Decontamination Method
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PhiX decontamination |
GenePRIMP |
Yes |
Scaffold Count
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6 |
Contig Count
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|
Gene Calling Method
(MIGS-32)
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|
Gene Count |
2783 |
Estimated Size |
3081443 |
Sequencing Depth
(MIGS-31.1)
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348x |
Annotation Pipeline |
IMG Annotation Pipeline v.4.15.1 |
Added By |
JGI automated process
on 2017-04-09 |
Last Modified By |
JGI automated process
on 2017-05-20 |
Non-SP-Owner AP |
No |
PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
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2734482284 |
IMG RNA-Seq ID |
|
Genbank ID
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|
Assembly Accession |
|
Assembly Methods |
|
ANALYSIS PROJECT COMPOSITION | |
Study |
Genomic Encyclopedia of Archaeal and Bacterial Type Strains, Phase II (KMG-II): from individual species to whole genera |
Number of Studies
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1 |
Number of Projects
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1 |
Number of Related Analysis Projects
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0 |
Derived Analysis Projects
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0 |
JGI INFORMATION | |
ITS Analysis Project ID
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1139728 (Portal) |
ITS Analysis Project Name
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Pedobacter bauzanensis DSM 22554 |
ITS Analysis Product Name
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Microbial Minimal Draft Isolate Genome |
ITS NCBI Taxon ID |
|
ITS Version Number |
1 |
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