ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0175862
Analysis Project Name Prefix Rhodobacter sp. LPB0142
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 118135
Completion Status Complete
Completion Date 2017-03-09
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) PacBio SMRT Analysis v. 2.3.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 4
Contig Count 4
Gene Calling Method (MIGS-32)
Gene Count 3783
Estimated Size 3780829
Sequencing Depth (MIGS-31.1) 295.35x
Annotation Pipeline IMG Annotation Pipeline v.4.14.6
Added By JGI automated process on 2017-02-21
Last Modified By JGI automated process on 2017-11-17
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2718218090
IMG RNA-Seq ID
Genbank
Genbank ID CP017781 (GCA_001856665.1)
Release Date 2016-11-02
NCBI Genbank Version CP017781.1
Genbank ID CP017782 (GCA_001856665.1)
Release Date 2016-11-02
NCBI Genbank Version CP017782.1
Genbank ID CP017783 (GCA_001856665.1)
Release Date 2016-11-02
NCBI Genbank Version CP017783.1
Genbank ID CP017784 (GCA_001856665.1)
Release Date 2016-11-02
NCBI Genbank Version CP017784.1
Assembly Accession GCA_001856665.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Rhodobacter sp. LPB0142 Genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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