ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0175592
Analysis Project Name Prefix Chlamydia trachomatis E-160
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 117756
Completion Status Complete
Completion Date 2017-03-09
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) AMOScmp v. 3.1.0; MaSuRCA v. 2.3.0rc1;SPAdes v. 3.1.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 2
Contig Count 2
Gene Calling Method (MIGS-32)
Gene Count 952
Estimated Size 1050509
Sequencing Depth (MIGS-31.1) 680
Annotation Pipeline IMG Annotation Pipeline v.4.14.6
Added By JGI automated process on 2017-02-21
Last Modified By JGI automated process on 2017-11-17
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2718217781
IMG RNA-Seq ID
Genbank
Genbank ID CP015296 (GCA_001655375.1)
Release Date 2016-06-10
NCBI Genbank Version CP015296.1
Genbank ID CP015297 (GCA_001655375.1)
Release Date 2016-06-10
NCBI Genbank Version CP015297.1
Assembly Accession GCA_001655375.1
ANALYSIS PROJECT COMPOSITION
Study Resequencing of Chlamydia trachomatis E and F strains
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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