ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0169268
Analysis Project Name Prefix Achromatium sp. Cell3
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (screened)
IMG Submission ID 109906
Completion Status Complete
IMG Completion Date 2017-01-19
PI Danny Ionescu
Description Normalization with bbnorm, assembly with Spades 3.9, binning with MetaWatt, annotation with Prokka
Contamination Screening Method Binning with MetaWatt, rRNA gene calling
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Spades 3.9
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 843
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3486
Estimated Size 2668376
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.14.3
Added By Danny Ionescu on 2017-01-09
Last Modified By JGI automated process on 2018-02-14
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2711768587
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Hand-picked under binocular Achromatium cells from sediments of Lake Stechlin, Neuglobsow, Germany
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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