ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0146499
Analysis Project Name Prefix Pseudomonas denitrificans 1184_PDEN
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 169603
Completion Status Complete
Completion Date 2018-01-26
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) ABYSS v. 1.3.5
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 123
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 6757
Estimated Size 7060382
Sequencing Depth (MIGS-31.1) 46x
Annotation Pipeline IMG Annotation Pipeline v.4.16.0
Added By JGI automated process on 2016-10-21
Last Modified By JGI automated process on 2018-02-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2767802255
IMG RNA-Seq ID
Genbank
Genbank ID JVZW00000000 (GCA_001062205.1)
Release Date 2016-07-20
NCBI Genbank Version JVZW01
Assembly Accession GCA_001062205.1
ANALYSIS PROJECT COMPOSITION
Study Whole genome sequencing of bacterial isolates collected over a 1-year period from the intensive care unit of University of Washington Medical Center
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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