ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0138994
Analysis Project Name Prefix Sphingopyxis terrae ummariensis UI2
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 105305
Completion Status Complete
Completion Date 2016-12-09
PI rup lal
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.6.2
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP Yes
Scaffold Count 8
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3492
Estimated Size 3577011
Sequencing Depth (MIGS-31.1) 257x
Annotation Pipeline IMG Annotation Pipeline v.4.12.2
Added By JGI automated process on 2016-10-06
Last Modified By JGI automated process on 2019-06-19
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2708742469
IMG RNA-Seq ID
Genbank
Genbank ID FXWL00000000 (GCA_900177755.1)
Release Date 2017-05-24
NCBI Genbank Version FXWL01
Assembly Accession GCA_900177755.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genomic Encyclopedia of Type Strains, Phase III (KMG-III): the genomes of soil and plant-associated and newly described type strains
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1118293 (Portal)
ITS Analysis Project Name Sphingopyxis ummariensis UI2
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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