ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0133408
Analysis Project Name Prefix Chlamydia trachomatis E/CS1025/11
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 92255
Completion Status Complete
Completion Date 2016-07-27
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Bowtie2 v. 2.1.0; BWA v. 0.7.5.a
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 2
Contig Count 2
Gene Calling Method (MIGS-32)
Gene Count 949
Estimated Size 1050536
Sequencing Depth (MIGS-31.1) 464x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-07-01
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2687453562
IMG RNA-Seq ID
Genbank
Genbank ID CP010567 (GCA_001183805.1)
Release Date 2015-09-02
NCBI Genbank Version CP010567.1
Genbank ID CP010568 (GCA_001183805.1)
Release Date 2015-09-02
NCBI Genbank Version CP010568.1
Assembly Accession GCA_001183805.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Chlamydia trachomatis genome sequencing - NIH, Portugal
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

  You are going to add the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your analysis project, project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the AP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Changing the AP visibility will also change downgrade visibility on the following items:

 

Do you want to continue with this visibility change?