ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0133385
Analysis Project Name Prefix Pediococcus damnosus TMW 2.1534
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 92242
Completion Status Complete
Completion Date 2016-07-27
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Celera Assembler v. 1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 5
Contig Count 5
Gene Calling Method (MIGS-32)
Gene Count 2324
Estimated Size 2281098
Sequencing Depth (MIGS-31.1) 138
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-07-01
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2687453549
IMG RNA-Seq ID
Genbank
Genbank ID CP012283 (GCA_001611115.1)
Release Date 2016-04-07
NCBI Genbank Version CP012283.1
Genbank ID CP012287 (GCA_001611115.1)
Release Date 2016-04-07
NCBI Genbank Version CP012287.1
Genbank ID CP012284 (GCA_001611115.1)
Release Date 2016-04-07
NCBI Genbank Version CP012284.1
Genbank ID CP012285 (GCA_001611115.1)
Release Date 2016-04-07
NCBI Genbank Version CP012285.1
Genbank ID CP012286 (GCA_001611115.1)
Release Date 2016-04-07
NCBI Genbank Version CP012286.1
Assembly Accession GCA_001611115.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of beer-spoiling and non-spoiling strains isolated from a brewery
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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