ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0132969
Analysis Project Name Prefix Lactobacillus plantarum Nizo1837
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 143717
Completion Status Complete
IMG Completion Date 2017-08-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.5.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 30
Contig Count 48
Gene Calling Method (MIGS-32)
Gene Count 3204
Estimated Size 3302451
Sequencing Depth (MIGS-31.1) 20.0x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-07-01
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2744054681
IMG RNA-Seq ID
Genbank
Genbank ID LTAU00000000 (GCA_001651845.1)
Release Date 2016-06-03
NCBI Genbank Version LTAU01
Assembly Accession GCA_001651845.1
Genbank Release Date 2016-06-03
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Lactobacillus plantarum Nizo1837 genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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