ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0132877
Analysis Project Name Prefix Vibrio cholerae 6/67
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 143631
Completion Status Complete
IMG Completion Date 2017-08-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.6
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 94
Contig Count 182
Gene Calling Method (MIGS-32)
Gene Count 3906
Estimated Size 3962924
Sequencing Depth (MIGS-31.1) 48.0x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-07-01
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2744054595
IMG RNA-Seq ID
Genbank
Genbank ID LRFF00000000 (GCA_001641745.1)
Release Date 2016-05-12
NCBI Genbank Version LRFF01
Assembly Accession GCA_001641745.1
Genbank Release Date 2016-05-12
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Vibrio cholerae 6/67 genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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