ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0130875
Analysis Project Name Prefix Streptococcus pyogenes SST2245-1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 142097
Completion Status Complete
IMG Completion Date 2017-07-31
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. JULY-2015
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 17
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1693
Estimated Size 1740786
Sequencing Depth (MIGS-31.1) 133.0x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-06-17
Last Modified By JGI automated process on 2016-06-19
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2740892003
IMG RNA-Seq ID
Genbank
Genbank ID LRHJ00000000 (GCA_001638865.1)
Release Date 2016-05-12
NCBI Genbank Version LRHJ01
Assembly Accession GCA_001638865.1
Genbank Release Date 2016-05-12
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sequencing of Streptococcus pyogenes human skin isolates from households in Darwin, Australia
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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