ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0129390
Analysis Project Name Prefix Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA2
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome mapping (self)
IMG Submission ID 106889
Completion Status Incomplete
IMG Completion Date
PI Barbara Campbell
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32)
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By JGI automated process on 2016-06-12
Last Modified By JGI automated process on 2019-10-07
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID 6637
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Aqueous microbial communities from the Delaware River/Bay and Chesapeake Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series
Number of Projects 1
Reference Analysis Project Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA2 (Metagenome Metatranscriptome)
JGI INFORMATION
ITS Analysis Project ID 1110904 (Portal)
ITS Analysis Project Name CPBay_Sum_15_0.2_RNA2 Expression - Self
ITS Analysis Product Name Metagenome Metatranscriptome Expression - Self
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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