ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0128986
Analysis Project Name Prefix Pseudomonas amygdali pv. ulmi CFBP 1407
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 129422
Completion Status Complete
Completion Date 2017-05-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 2.4.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 278
Contig Count 319
Gene Calling Method (MIGS-32)
Gene Count 6254
Estimated Size 6381010
Sequencing Depth (MIGS-31.1) 124.0x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-06-07
Last Modified By JGI automated process on 2016-06-08
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2731957951
IMG RNA-Seq ID
Genbank
Genbank ID LIHQ00000000 (GCA_001535915.1)
Release Date 2016-01-26
NCBI Genbank Version LIHQ01
Assembly Accession GCA_001535915.1
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing and assembly of strains from Pseudomonas syringae species complex - University of Edinburgh
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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