ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0128302
Analysis Project Name Prefix Lactobacillus kefiranofaciens kefirgranum JCM 8572
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 126153
Completion Status Complete
Completion Date 2017-04-28
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.8
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 87
Contig Count 104
Gene Calling Method (MIGS-32)
Gene Count 3017
Estimated Size 2053650
Sequencing Depth (MIGS-31.1) 47x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2016-06-07
Last Modified By JGI automated process on 2017-03-02
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2728369681
IMG RNA-Seq ID
Genbank
Genbank ID BBAQ00000000 (GCA_001311335.1)
Release Date 2015-10-01
NCBI Genbank Version BBAQ01
Assembly Accession GCA_001311335.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Lactobacillus Genome sequencing - The University of Tokyo
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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