ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0126102
Analysis Project Name Prefix Ponticoccus marisrubri SJ5A-1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 112306
Completion Status Complete
Completion Date 2017-04-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. May-2011
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 46
Contig Count 116
Gene Calling Method (MIGS-32)
Gene Count 4461
Estimated Size 4540478
Sequencing Depth (MIGS-31.1) 12.0x
Annotation Pipeline IMG Annotation Pipeline v.4.14.7
Added By JGI automated process on 2016-05-27
Last Modified By Supratim Mukherjee on 2018-01-04
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2724679114
IMG RNA-Seq ID
Genbank
Genbank ID LPXO00000000 (GCA_001482405.1)
Release Date 2015-12-31
NCBI Genbank Version LPXO01
Assembly Accession GCA_001482405.1
ANALYSIS PROJECT COMPOSITION
Study Ponticoccus sp. SJ5A-1 Genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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