ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0125599
Analysis Project Name Prefix Vibrio cholerae 2010AA-151
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 111159
Completion Status Complete
Completion Date 2017-02-02
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 1.2.10
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 60
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3656
Estimated Size 4001410
Sequencing Depth (MIGS-31.1) 75.0x
Annotation Pipeline IMG Annotation Pipeline v.4.14.3
Added By JGI automated process on 2016-05-27
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2713897095
IMG RNA-Seq ID
Genbank
Genbank ID JSTB00000000 (GCA_000788635.1)
Release Date 2015-08-17
NCBI Genbank Version JSTB01
Assembly Accession GCA_000788635.1
ANALYSIS PROJECT COMPOSITION
Study Vibrio cholerae Genome sequencing - University of Florida
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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