ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0125223
Analysis Project Name Prefix Sphingopyxis terrae terrae NBRC 15098 203-1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 91675
Completion Status Complete
Completion Date 2016-07-12
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) newbler v. 2.8
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 2
Contig Count 2
Gene Calling Method (MIGS-32)
Gene Count 3849
Estimated Size 3983415
Sequencing Depth (MIGS-31.1) 110x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-05-27
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2684623122
IMG RNA-Seq ID
Genbank
Genbank ID CP013342 (GCA_001610975.1)
Release Date 2016-04-07
NCBI Genbank Version CP013342.1
Genbank ID CP013343 (GCA_001610975.1)
Release Date 2016-04-07
NCBI Genbank Version CP013343.1
Assembly Accession GCA_001610975.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sphingopyxis terrae NBRC 15098 Genome sequencing and assembly
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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