ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0125053
Analysis Project Name Prefix Mycobacterium avium paratuberculosis E1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 92006
Completion Status Complete
IMG Completion Date 2016-07-27
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 1
Contig Count 1
Gene Calling Method (MIGS-32)
Gene Count 4628
Estimated Size 4781002
Sequencing Depth (MIGS-31.1) 653.06x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-05-27
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2687453313
IMG RNA-Seq ID
Genbank
Genbank ID CP010113 (GCA_000835225.1)
Release Date 2015-08-19
NCBI Genbank Version CP010113.1
Assembly Accession GCA_000835225.1
Genbank Release Date 2015-08-19
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Ecology and Genomic Features of Infection with Mycobacterium avium subspecies paratuberculosis in Egypt.
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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