ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0123583
Analysis Project Name Prefix Pseudomonas fluorescens FW300-N2E3
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 91741
Completion Status Complete
Completion Date 2016-07-12
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. version 3.0; AHA v. version2.3.0; Bridgegapper v. version 2.3.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 1
Contig Count 1
Gene Calling Method (MIGS-32)
Gene Count 6065
Estimated Size 6391871
Sequencing Depth (MIGS-31.1) 40.0x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-05-20
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2684623188
IMG RNA-Seq ID
Genbank
Genbank ID CP012830 (GCA_001307155.1)
Release Date 2015-10-08
NCBI Genbank Version CP012830.1
Assembly Accession GCA_001307155.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Pseudomonas fluorescens Genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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