ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0123445
Analysis Project Name Prefix Variovorax paradoxus H061
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 100481
Completion Status Complete
IMG Completion Date 2016-11-22
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.5.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 177
Contig Count 197
Gene Calling Method (MIGS-32)
Gene Count 8979
Estimated Size 9615061
Sequencing Depth (MIGS-31.1) 55.0x
Annotation Pipeline IMG Annotation Pipeline v.4.13.0
Added By JGI automated process on 2016-05-13
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2706794494
Genbank Accession
Genbank ID LKTU00000000 (GCA_001401735.1)
Release Date 2015-11-10
NCBI Genbank Version LKTU01
Assembly Accession GCA_001401735.1
Genbank Release Date 2015-11-10
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of isolates from drinking water distribution system in Cincinnati, Ohio
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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