ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0122475
Analysis Project Name Prefix Sphingopyxis sp. H085
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 100160
Completion Status Complete
Completion Date 2016-11-04
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.5.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 66
Contig Count 74
Gene Calling Method (MIGS-32)
Gene Count 5003
Estimated Size 5216672
Sequencing Depth (MIGS-31.1) 60.0x
Annotation Pipeline IMG Annotation Pipeline v.4.12.1
Added By JGI automated process on 2016-05-10
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2703718757
IMG RNA-Seq ID
Genbank
Genbank ID LNRX00000000 (GCA_001467385.1)
Release Date 2015-12-25
NCBI Genbank Version LNRX01
Assembly Accession GCA_001467385.1
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of isolates from drinking water distribution system in Cincinnati, Ohio
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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