ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0122473
Analysis Project Name Prefix Sphingopyxis sp. H077
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 100158
Completion Status Complete
IMG Completion Date 2016-11-04
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.5.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 63
Contig Count 66
Gene Calling Method (MIGS-32)
Gene Count 5014
Estimated Size 5255102
Sequencing Depth (MIGS-31.1) 57.0x
Annotation Pipeline IMG Annotation Pipeline v.4.12.1
Added By JGI automated process on 2016-05-10
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2703718755
Genbank Accession
Genbank ID LNRV00000000 (GCA_001467445.1)
Release Date 2015-12-25
NCBI Genbank Version LNRV01
Assembly Accession GCA_001467445.1
Genbank Release Date 2015-12-25
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of isolates from drinking water distribution system in Cincinnati, Ohio
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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